doc. Mgr. David Bednář, Ph.D.

2026

• Accessible biocatalyst development by rapid in vitro semi-rational engineering (RISE) of enzymes

  TELEK Andras GAJAK Viktor Zsolt DARGO Gergo MIČAN Jan BEDNÁŘ David VERTESSY Beata G. TASNADI Gabor

  Peer-reviewed scientific article

  iScience, year: 2026, volume: 29, edition: 1, DOI

• FireProtDB 2.0: large-scale manually curated database of the protein stability data

  MUSIL Miloš BORKO Simeon PLANAS IGLESIAS Joan LACKO Dávid ROSINSKA Monika KABOUREK Petr MARTINS Ligia O. TATARUCH Mateusz DAMBORSKÝ Jiří MAZURENKO Stanislav BEDNÁŘ David

  Peer-reviewed scientific article

  NUCLEIC ACIDS RESEARCH, year: 2026, volume: 54, edition: D1, DOI

• Full-Size Structural and Energetic Modeling of the Staphylokinase Active Complex

  DE MARTINES Tim Titus Hendrikus KAŠIAROVÁ Linda STRUNGA Alan MAREK Martin PROKOP Zbyněk DAMBORSKÝ Jiří BEDNÁŘ David

  Conference abstract

  Year: 2026, type: Conference abstract

• Mobilizing the Biocatalysis Community for Reproducible and Reusable Data Collection

  MARQUES Sérgio Manuel PLANAS IGLESIAS Joan VELECKÝ Jan MUSIL Miloš ASANO Yasuhisa BOROWSKI Tomasz BRISSOS Vania CESPUGLI Marco CHOROZIAN Koar DADASHIPOUR Mohammad ERDEM Elif FERRANDI Erica Elisa GRIGORAKIS Konstantinos KLUZA Anna LAWNICZEK Janina MAKRYNIOTIS Konstantinos MONTI Daniela NESTL Bettina NGO Anna C. NIKOLAIVITS Efstratios PATTI Stefania PENTARI Christina RODRIGUES Carolina F. SCHOPPER Tobias SEWERYN-OZOG Karolina SZALENIEC Maciej TABORDA Andre TATARUCH Mateusz TISCHLER Dirk TOPAKAS Evangelos WANG Jingyu WOJCIK Patrycja WOJTKIEWICZ Agnieszka M. WOODLEY John M. ZASTAWNY Olga MARTINS Ligia O. FRAAIJE Marco PLEISS Jurgen SCHNELL Santiago DAMBORSKÝ Jiří MAZURENKO Stanislav BEDNÁŘ David

  Article in Periodical (without peer review)

  Year: 2026, type: Article in Periodical (without peer review)

• Structural insights into the evolution of alpha/beta-hydrolase fold luciferases

  MAJEROVÁ Marika HORÁČKOVÁ Jana SEDLÁČKOVÁ Karolina ŠULOVÁ Marie KOVÁŘ David DAMBORSKÝ Jiří PROKOP Zbyněk BEDNÁŘ David MAREK Martin

  Peer-reviewed scientific article

  International journal of biological macromolecules, year: 2026, volume: 361, edition: May 2026, DOI

• The effect of salidroside, an active component of Rhodiola rosea, on the metabolic activity of rat and human cytochromes P450 in preclinical studies

  KLÁSKOVÁ Eva JUŘICA Jan DANEK Przemyslaw Jan MLČŮCHOVÁ Natálie EYRILMEZ Saltuk Mustafa BOŘILOVÁ LINHARTOVÁ Petra BEDNÁŘ David KAMARAJ Rajamanikkam DANIEL Wladyslawa Anna ZENDULKA Ondřej

  Peer-reviewed scientific article

  Pharmacological Reports, year: 2026, volume: 78, edition: 3, DOI

2025

• Acridine-Based Chalcone 1C and ABC Transporters

  FRANKO Ondrej CIZMARIKOVA Martina KELLO Martin MICHALKOVA Radka WESOLOWSKA Olga SRODA-POMIANEK Kamila MARQUES Sérgio Manuel BEDNÁŘ David HAZIKOVA Viktoria LISKA Tomas Jan HABALOVA Viera

  Peer-reviewed scientific article

  International Journal of Molecular Sciences, year: 2025, volume: 26, edition: 9, DOI

• Anticipating protein evolution with successor sequence predictor

  KHAN Rayyan Tariq KOHOUT Pavel MUSIL Miloš ROSINSKÁ Monika DAMBORSKÝ Jiří MAZURENKO Stanislav BEDNÁŘ David

  Peer-reviewed scientific article

  Journal of Cheminformatics, year: 2025, volume: 17, edition: 1, DOI

• Automated Engineering Protein Dynamics via Loop Grafting: Improving Renilla Luciferase Catalysis

  PLANAS IGLESIAS Joan MAJEROVÁ Marika PLUSKAL Daniel VAŠINA Michal DAMBORSKÝ Jiří PROKOP Zbyněk MAREK Martin BEDNÁŘ David

  Peer-reviewed scientific article

  ACS Catalysis, year: 2025, volume: 15, edition: 4, DOI

• Caver Web 2.0: analysis of tunnels and ligand transport in dynamic ensembles of proteins

  MARQUES Sérgio Manuel BORKO Simeon VÁVRA Ondřej DVORSKÝ Jan KOHOUT Pavel KABOUREK Petr HEJTMÁNEK Lukáš DAMBORSKÝ Jiří BEDNÁŘ David

  Peer-reviewed scientific article

  Nucleic Acids Research, year: 2025, volume: 53, edition: W1, DOI